马昕
发布时间:2017-03-07 浏览次数:

 

 

 

 

南京审计大学理学院
马昕
最后学位
:东南大学工学博士
岗位职称:副教授                           
 
研究领域:生物信息学
教学课程:微积分、线性代数、概率论与数理统计

办公室:竞慧西楼410
电  话:86-025-58318699
Emai l :maxin@nau.edu.cn
通讯地址:南京市浦口区雨山西路86号
邮  编:211815
 
学习简历                                                                                 
1999.09 – 2003.06 苏州大学数学科学学院 数学与应用数学专业 理学学士
2003.09 – 2006.06 苏州大学数学科学学院 应用数学专业 理学硕士
2008.09 – 2012.09 东南大学生物医学工程学院 生物医学工程专业 工学博士
 
工作简历                                                                                 
2006.06 - 2008.10南京审计大学助教
2008.10-2014.07南京审计大学     讲师
2014.07 –现在南京审计大学     副教授
 
主持参与课题
1.     DNA\RNA相互结合的蛋白质预测与统计分析,国家自然科学基金,项目批准号:61305072(主持人)
2.    基于机器学习算法的SmallRNA-结合位点预测,江苏省高校自然科学研究计划项目,项目批准号:14KJB520020(主持人)
3.     基于序列的蛋白质与DNA相互作用的预测研究,江苏省高校自然科学研究计划项目,项目批准号:12KJD520006(主持人)
4.    支持向量机和随机森林算法在海量数据分析中的应用,南京审计大学校级课题,项目批准号:NSK2009/01(主持人)
5.      人类基因组遗传变异与核小体定位的相互作用研究,国家自然科学基金,项目批准号:31240080(参与,4/8)
6.     核小体定位的动态调控信息分析,国家自然科学基金,项目批准号:61073141(参与,6/10)
7.     动态核小体定位及其在癌细胞中的基因调节作用研究,江苏省自然科学基金面上项目,项目批准号:BK2010406(参与,9/9)
 
发表论文
1. Xin Ma*, Jing Guoand Xiao Sun, DNABP: Identification of DNA-binding proteins based on feature selection using a random forest and predicting binding residues, PLoS ONE, 11(12):e0167345, 2016. (SCI)
2. Xin Ma*, Jing Guo, Ke Xiao and Xiao Sun, PRBP: Prediction of RNA-binding proteins using a random forest algorithm combined with an RNA-binding residue predictor,IEEE/ACM Transactions on Computational Biology and Bioinformatics,12(6), 1385-1393,2015. (SCI)
3. Xin Ma*, Jing Guo and Xiao Sun, Sequence-Based Prediction of RNA-Binding Proteins Using Random Forest with Minimum Redundancy Maximum Relevance Feature Selection,BioMed Research International, volume 2015, Article ID 425810, 10 pagehttp://dx.doi.org/10.1155/2015/425810, 2015. (SCI)
4. Xin Ma* and Xiao Sun, Sequence-based predictor of ATP-binding residues using random forest and mRMR-IFS feature selection, Journal of Theoretical Biology, 360: 59-66, 2014. (SCI)
5. Xin Ma*, Jiansheng Wu and XiaoyunXue, Identification of DNA-binding proteins using support vector machine with sequence information, Computational and Mathematical Methods in Medicine,2013:524502, doi: 10.1155/2013/524502, 2013. (SCI)
6. Xin Ma, Jing Guo, Hongde Liu, JianmingXie and Xiao Sun*, Sequence-based prediction of DNA-binding residues in proteins with conservation and correlation information, IEEE/ACM Transactions on Computational Biology and Bioinformatics, 41(2), 213-224, 2012. (SCI)
7. Xin Ma, Jing Guo, Jiansheng Wu, Hongde Liu, Jiafeng Yu, JianmingXie and Xiao Sun*, Prediction of RNA-binding residues in proteins from primary sequence using an enriched random forest model with a novel hybrid feature,Proteins, 79(4), 1230-1239, 2011.(SCI)
8. 马昕,郭静,孙啸*,蛋白质中RNA-结合残基预测的随机森林模型,东南大学学报(自然科学版),42(1),50-54,2012. (EI)
9. Hongde Liu*, Kun Luo, Hao Wen, Xin Ma, JianmingXie, Xiao Sun, Quantitative analysis reveals increased histone modifications and a broad nucleosome-free region bound by histone acetylases in highly expressed genes in human CD4(+) T cell, Genomics, 101(2), 113-119. 2013. (SCI)  
10. ChangchangCao,ChengLi,Zheng Huang,XinMaandXiaoSun*, Identifying rare variants with optimal depth of coverage and cost-effective overlapping pool sequencing, Genetic epidemiology, 37(8), 820-30, 2013. (SCI)
 
科研奖励
1.     马昕,2014,江苏省青蓝工程优秀青年骨干教师,江苏省教育厅